兩個grd
和range
是類SpatialPolygonsDataFrame
的。
range
具有這樣的結構:
> str(range)
Formal class 'SpatialPolygonsDataFrame' [package "sp"] with 5 slots
[email protected] data :'data.frame': 3 obs. of 17 variables:
.. ..$ OBJECTID : int [1:3] 725 726 727
.. ..$ SPCRECID : int [1:3] 3313 3313 3313
.. ..$ DATE_ : Factor w/ 1 level "19/10/2009": 1 1 1
.. ..$ SCINAME : Factor w/ 1 level "Synthliboramphus antiquus": 1 1 1
.. ..$ SOURCE : Factor w/ 1 level "Gaston & Jones, 1998; Brazil, 2009": 1 1 1
.. ..$ PRESENCE : int [1:3] 1 1 1
.. ..$ ORIGIN : int [1:3] 1 1 1
.. ..$ SEASONAL : int [1:3] 2 1 3
.. ..$ DATA_SENS : Factor w/ 0 levels: NA NA NA
.. ..$ SENS_COMM : Factor w/ 0 levels: NA NA NA
.. ..$ COMPILER : Factor w/ 1 level "Philip Taylor (BirdLife International)": 1 1 1
.. ..$ TAX_COM : Factor w/ 0 levels: NA NA NA
.. ..$ DIST_COM : Factor w/ 0 levels: NA NA NA
.. ..$ REVIEWERS : Factor w/ 0 levels: NA NA NA
.. ..$ CITATION : Factor w/ 1 level "BirdLife International and Natureserve (2011) Bird species distribution maps of the world.": 1 1 1
.. ..$ SHAPE_Leng: num [1:3] 190 209 1240
.. ..$ SHAPE_Area: num [1:3] 39 16.6 600.8
.. ..- attr(*, "data_types")= chr [1:17] "N" "N" "C" "C" ...
[email protected] polygons :List of 3
.. ..$ :Formal class 'Polygons' [package "sp"] with 5 slots
.. .. .. [email protected] Polygons :List of 138
.. .. .. .. ..$ :Formal class 'Polygon' [package "sp"] with 5 slots
.. .. .. .. .. .. [email protected] labpt : num [1:2] 178.6 51.8
.. .. .. .. .. .. [email protected] area : num 4.58
.. .. .. .. .. .. [email protected] hole : logi FALSE
.. .. .. .. .. .. [email protected] ringDir: int 1
.. .. .. .. .. .. [email protected] coords : num [1:49, 1:2] 180 180 179 179 179 ...
.. .. .. .. ..$ :Formal class 'Polygon' [package "sp"] with 5 slots
.. .. .. .. .. .. [email protected] labpt : num [1:2] -172.2 52.6
...等等。
grd
具有這樣的結構:
> str(grd)
Formal class 'SpatialPolygonsDataFrame' [package "sp"] with 5 slots
[email protected] data :'data.frame': 40680 obs. of 12 variables:
.. ..$ ID : int [1:40680] 361 362 363 364 365 366 367 368 369 370 ...
.. ..$ X_COORD : num [1:40680] -180 -178 -178 -176 -176 ...
.. ..$ Y_COORD : num [1:40680] 79.1 79.1 79.1 79.1 79.1 ...
.. ..$ ID_1 : Factor w/ 13713 levels "10","10000","10001",..: NA NA NA NA NA NA NA NA NA NA ...
.. ..$ grdID : int [1:40680] 1 2 3 4 5 6 7 8 9 10 ...
.. ..$ ROW : int [1:40680] 1 1 1 1 1 1 1 1 1 1 ...
.. ..$ COL : int [1:40680] 1 2 3 4 5 6 7 8 9 10 ...
.. ..$ AREA : num [1:40680] 12364 12364 12364 12364 12364 ...
.. ..$ PERIMETER : num [1:40680] 445 445 445 445 445 ...
.. ..$ MAJORITY : int [1:40680] 0 0 0 0 0 0 0 0 0 0 ...
.. ..$ PROP0_0062: num [1:40680] 0 0 0 0 0 0 0 0 0 0 ...
.. ..$ AREA_KM2 : num [1:40680] 0 0 0 0 0 0 0 0 0 0 ...
.. ..- attr(*, "data_types")= chr [1:12] "N" "N" "N" "C" ...
[email protected] polygons :List of 40680
.. ..$ :Formal class 'Polygons' [package "sp"] with 5 slots
.. .. .. [email protected] Polygons :List of 1
.. .. .. .. ..$ :Formal class 'Polygon' [package "sp"] with 5 slots
.. .. .. .. .. .. [email protected] labpt : num [1:2] -179.5 79.1
.. .. .. .. .. .. [email protected] area : num 5.3
.. .. .. .. .. .. [email protected] hole : logi FALSE
.. .. .. .. .. .. [email protected] ringDir: int 1
.. .. .. .. .. .. [email protected] coords : num [1:13, 1:2] -179 -180 -180 -180 -180 ...
.. .. .. [email protected] plotOrder: int 1
.. .. .. [email protected] labpt : num [1:2] -179.5 79.1
...等等。
我發現這幫助從Roger Bivand這工作了三分之二的有問題的文件:
>slot(shape.input, "polygons") <- lapply(slot(shape.input, "polygons"), checkPolygonsHoles)
>range.grd.overlay <- grd[!is.na(over(grd, range)), ]@data$grdID # get gridcells of that overlay with range polygon
但對於第三檔的固定沒有工作。 R.將凍結,直到我最終按下Esc鍵,之後試圖使空間疊加時,我會得到同樣的錯誤信息:
Error in createPolygonsComment(p) :
rgeos_PolyCreateComment: orphaned hole, cannot find containing polygon for hole at index 13
沒有人會對此有所幫助,因爲我們有對GRD或結構不知道範圍。許多對象可能有一個@ data $ grdID插槽。這需要做一個可重現的例子。但是,使用(免費)QGIS與幾何工具或(負擔得起的)與拓撲工廠的歧管交互式幾何檢查。 – mdsumner 2012-07-11 13:31:08
這聽起來像刪除索引9的洞應該工作。當你嘗試時會發生什麼? 'taRifx'包中的'subset'應該做到這一點,如果你沒有更好的方法(我現在還沒有使用空間方法)。 – 2012-07-11 13:32:12
好吧,我明白了,對不起,我的問題沒有具體說明: – user1012744 2012-07-11 15:01:16