2016-02-26 140 views
4

這是釀造列表和PIP列表如何安裝pygraphviz與PIP

(lebienv) ➜ lebi git:(master) ✗ brew list 
graphviz libpng  libxml2  mysql  openssl 
(lebienv) ➜ lebi git:(master) ✗ pip list 
Flask (0.10.1) 
itsdangerous (0.24) 
Jinja2 (2.8) 
MarkupSafe (0.23) 
pip (8.0.3) 
setuptools (20.1.1) 
Werkzeug (0.11.4) 
wheel (0.29.0) 
(lebienv) ➜ lebi git:(master) ✗ 

和EXCUTE pip install pygraphviz

(lebienv) ➜ lebi git:(master) ✗ pip install pygraphviz 
Collecting pygraphviz 
    Using cached pygraphviz-1.3.1.tar.gz 
Building wheels for collected packages: pygraphviz 
    Running setup.py bdist_wheel for pygraphviz ... error 
    Complete output from command /Users/zyl/song/lebi/lebienv/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/5t/965cgdc56ks37w8pmlmw4vx40000gn/T/pip-build-x2Vstw/pygraphviz/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /var/folders/5t/965cgdc56ks37w8pmlmw4vx40000gn/T/tmp7z72M3pip-wheel- --python-tag cp27: 
    running bdist_wheel 
    running build 
    running build_py 
    creating build 
    creating build/lib.macosx-10.11-intel-2.7 
    creating build/lib.macosx-10.11-intel-2.7/pygraphviz 
    copying pygraphviz/__init__.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz 
    copying pygraphviz/agraph.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz 
    copying pygraphviz/graphviz.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz 
    copying pygraphviz/release.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz 
    copying pygraphviz/version.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz 
    creating build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/__init__.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_attribute_defaults.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_attributes.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_clear.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_drawing.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_edge_attributes.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_graph.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_html.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_layout.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_node_attributes.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_readwrite.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_string.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_subgraph.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    copying pygraphviz/tests/test_unicode.py -> build/lib.macosx-10.11-intel-2.7/pygraphviz/tests 
    running egg_info 
    writing pygraphviz.egg-info/PKG-INFO 
    writing top-level names to pygraphviz.egg-info/top_level.txt 
    writing dependency_links to pygraphviz.egg-info/dependency_links.txt 
    warning: manifest_maker: standard file '-c' not found 

    reading manifest file 'pygraphviz.egg-info/SOURCES.txt' 
    reading manifest template 'MANIFEST.in' 
    warning: no previously-included files matching '*~' found anywhere in distribution 
    warning: no previously-included files matching '*.pyc' found anywhere in distribution 
    warning: no previously-included files matching '.svn' found anywhere in distribution 
    no previously-included directories found matching 'doc/build' 
    writing manifest file 'pygraphviz.egg-info/SOURCES.txt' 
    copying pygraphviz/graphviz.i -> build/lib.macosx-10.11-intel-2.7/pygraphviz 
    copying pygraphviz/graphviz_wrap.c -> build/lib.macosx-10.11-intel-2.7/pygraphviz 
    running build_ext 
    building 'pygraphviz._graphviz' extension 
    creating build/temp.macosx-10.11-intel-2.7 
    creating build/temp.macosx-10.11-intel-2.7/pygraphviz 
    cc -fno-strict-aliasing -fno-common -dynamic -arch i386 -arch x86_64 -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch i386 -arch x86_64 -pipe -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c pygraphviz/graphviz_wrap.c -o build/temp.macosx-10.11-intel-2.7/pygraphviz/graphviz_wrap.o 
    pygraphviz/graphviz_wrap.c:3321:12: warning: incompatible pointer to integer conversion returning 'Agsym_t *' (aka 'struct Agsym_s *') from a function with result type 'int' [-Wint-conversion] 
     return agattr(g, kind, name, val); 
      ^~~~~~~~~~~~~~~~~~~~~~~~~~ 
    pygraphviz/graphviz_wrap.c:3405:7: warning: unused variable 'fd1' [-Wunused-variable] 
    int fd1 ; 
     ^
    pygraphviz/graphviz_wrap.c:3406:13: warning: unused variable 'mode_obj1' [-Wunused-variable] 
    PyObject *mode_obj1 ; 
      ^
    pygraphviz/graphviz_wrap.c:3407:13: warning: unused variable 'mode_byte_obj1' [-Wunused-variable] 
    PyObject *mode_byte_obj1 ; 
      ^
    pygraphviz/graphviz_wrap.c:3408:9: warning: unused variable 'mode1' [-Wunused-variable] 
    char *mode1 ; 
     ^
    pygraphviz/graphviz_wrap.c:3463:7: warning: unused variable 'fd2' [-Wunused-variable] 
    int fd2 ; 
     ^
    pygraphviz/graphviz_wrap.c:3464:13: warning: unused variable 'mode_obj2' [-Wunused-variable] 
    PyObject *mode_obj2 ; 
      ^
    pygraphviz/graphviz_wrap.c:3465:13: warning: unused variable 'mode_byte_obj2' [-Wunused-variable] 
    PyObject *mode_byte_obj2 ; 
      ^
    pygraphviz/graphviz_wrap.c:3466:9: warning: unused variable 'mode2' [-Wunused-variable] 
    char *mode2 ; 
     ^
    9 warnings generated. 
    pygraphviz/graphviz_wrap.c:3295:15: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32] 
      len = strlen(val); 
       ~ ^~~~~~~~~~~ 
    pygraphviz/graphviz_wrap.c:3321:12: warning: incompatible pointer to integer conversion returning 'Agsym_t *' (aka 'struct Agsym_s *') from a function with result type 'int' [-Wint-conversion] 
     return agattr(g, kind, name, val); 
      ^~~~~~~~~~~~~~~~~~~~~~~~~~ 
    pygraphviz/graphviz_wrap.c:3313:15: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32] 
      len = strlen(val); 
       ~ ^~~~~~~~~~~ 
    pygraphviz/graphviz_wrap.c:3405:7: warning: unused variable 'fd1' [-Wunused-variable] 
    int fd1 ; 
     ^
    pygraphviz/graphviz_wrap.c:3406:13: warning: unused variable 'mode_obj1' [-Wunused-variable] 
    PyObject *mode_obj1 ; 
      ^
    pygraphviz/graphviz_wrap.c:3407:13: warning: unused variable 'mode_byte_obj1' [-Wunused-variable] 
    PyObject *mode_byte_obj1 ; 
      ^
    pygraphviz/graphviz_wrap.c:3408:9: warning: unused variable 'mode1' [-Wunused-variable] 
    char *mode1 ; 
     ^
    pygraphviz/graphviz_wrap.c:3463:7: warning: unused variable 'fd2' [-Wunused-variable] 
    int fd2 ; 
     ^
    pygraphviz/graphviz_wrap.c:3464:13: warning: unused variable 'mode_obj2' [-Wunused-variable] 
    PyObject *mode_obj2 ; 
      ^
    pygraphviz/graphviz_wrap.c:3465:13: warning: unused variable 'mode_byte_obj2' [-Wunused-variable] 
    PyObject *mode_byte_obj2 ; 
      ^
    pygraphviz/graphviz_wrap.c:3466:9: warning: unused variable 'mode2' [-Wunused-variable] 
    char *mode2 ; 
     ^
    11 warnings generated. 
    cc -bundle -undefined dynamic_lookup -arch i386 -arch x86_64 -Wl,-F. build/temp.macosx-10.11-intel-2.7/pygraphviz/graphviz_wrap.o -lcgraph -lcdt -o build/lib.macosx-10.11-intel-2.7/pygraphviz/_graphviz.so 
    ld: warning: ignoring file /usr/local/lib/libcdt.dylib, file was built for x86_64 which is not the architecture being linked (i386): /usr/local/lib/libcdt.dylib 
    ld: warning: ignoring file /usr/local/lib/libcgraph.dylib, file was built for x86_64 which is not the architecture being linked (i386): /usr/local/lib/libcgraph.dylib 
    installing to build/bdist.macosx-10.11-intel/wheel 
    running install 
    Trying pkg-config 
    Failed to find pkg-config 
    Trying dotneato-config 
    Failed to find dotneato-config 
    Failed to find dotneato-config 

    Your Graphviz installation could not be found. 

      1) You don't have Graphviz installed: 
      Install Graphviz (http://graphviz.org) 

      2) Your Graphviz package might incomplete. 
      Install the binary development subpackage (e.g. libgraphviz-dev or similar.) 

      3) You are using Windows 
      There are no PyGraphviz binary packages for Windows but you might be 
      able to build it from this source. See 
      http://networkx.lanl.gov/pygraphviz/reference/faq.html 

      If you think your installation is correct you will need to manually 
      change the include_dirs and library_dirs variables in setup.py to 
      point to the correct locations of your graphviz installation. 

      The current setting of library_dirs and include_dirs is: 
    library_dirs=None 
    include_dirs=None 

    error: Error locating graphviz. 

    ---------------------------------------- 
    Failed building wheel for pygraphviz 
    Running setup.py clean for pygraphviz 
Failed to build pygraphviz 
Installing collected packages: pygraphviz 
    Running setup.py install for pygraphviz ... error 
    Complete output from command /Users/zyl/song/lebi/lebienv/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/5t/965cgdc56ks37w8pmlmw4vx40000gn/T/pip-build-x2Vstw/pygraphviz/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /var/folders/5t/965cgdc56ks37w8pmlmw4vx40000gn/T/pip-1imEXi-record/install-record.txt --single-version-externally-managed --compile --install-headers /Users/zyl/song/lebi/lebienv/include/site/python2.7/pygraphviz: 
    running install 
    Trying pkg-config 
    Failed to find pkg-config 
    Trying dotneato-config 
    Failed to find dotneato-config 
    Failed to find dotneato-config 

    Your Graphviz installation could not be found. 

      1) You don't have Graphviz installed: 
       Install Graphviz (http://graphviz.org) 

      2) Your Graphviz package might incomplete. 
       Install the binary development subpackage (e.g. libgraphviz-dev or similar.) 

      3) You are using Windows 
       There are no PyGraphviz binary packages for Windows but you might be 
       able to build it from this source. See 
       http://networkx.lanl.gov/pygraphviz/reference/faq.html 

      If you think your installation is correct you will need to manually 
      change the include_dirs and library_dirs variables in setup.py to 
      point to the correct locations of your graphviz installation. 

      The current setting of library_dirs and include_dirs is: 
    library_dirs=None 
    include_dirs=None 

    error: Error locating graphviz. 

    ---------------------------------------- 
Command "/Users/zyl/song/lebi/lebienv/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/5t/965cgdc56ks37w8pmlmw4vx40000gn/T/pip-build-x2Vstw/pygraphviz/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /var/folders/5t/965cgdc56ks37w8pmlmw4vx40000gn/T/pip-1imEXi-record/install-record.txt --single-version-externally-managed --compile --install-headers /Users/zyl/song/lebi/lebienv/include/site/python2.7/pygraphviz" failed with error code 1 in /private/var/folders/5t/965cgdc56ks37w8pmlmw4vx40000gn/T/pip-build-x2Vstw/pygraphviz 

系統:Mac OS X 版本:10.11.1

如何解決問題。

+1

您應該先安裝Graphviz。 – pigletfly

+0

(lebienv)¶lebi git:(master)✗brew list graphviz – SylarSong

回答

1

設置library_dirsinclude_dirs正如錯誤消息中所建議的。 This article顯示如何設置它們。但是,首先確保pygraphviz實際上已安裝。

+0

pip install --install-option =「 - include-path =/usr/local/include/graphviz /「--install-option =」 - library-path =/usr/local/lib/graphviz「pygraphviz * Thanks @ jamjar * – prem

1

你試過

pip install git+git://github.com/pygraphviz/pygraphviz.git

在本issue建議?

+1

我試過了 但問題依然存在 – SylarSong