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由於MSVC-Express很好地隱藏了這樣的東西，我是linux下的編程新手，並且不熟悉makefile。但是現在我想玩一些我發現的代碼，但它不會在qtcreator中編譯。但是通過包中的makefile，我可以成功編譯和使用它。所以必須正確安裝所有依賴項（庫和頭文件），但在.pro文件中必須缺少某些內容。Makefile和QTCreator
也許一些可以幫助我，並給我一些提示如何找到缺少的設置。
工作的Makefile：
# Defining the compiler:
CC = g++
CUDACC = nvcc
SRCPATH=src
OBJPATH=obj
LIBPATH=lib
BINPATH=bin
OPTIMIZATION_LEVEL=-O3
DEBUG= #-Wall -g #-pg
DEBUG_CUDA = #-g --ptxas-options=-v #-deviceemu
SWITCHES= -msse2 -flax-vector-conversions
nj_cuda : SWITCHES += -DENABLEGPU
INCLUDES= -Isrc/distanceCalculation -Isrc/bootstrapping -Isrc/
nj_cuda : INCLUDES += -I /usr/local/cuda/include -Isrc/distanceCalculation/gpu
#use -pg for gprof profiling in both steps
# Defining the object files:
objects = $(OBJPATH)/main.o $(OBJPATH)/node.o $(OBJPATH)/distMatrixReader.o $(OBJPATH)/sortedNJ.o $(OBJPATH)/polytree.o $(OBJPATH)/diskMatrix.o $(OBJPATH)/rapidDisk.o $(OBJPATH)/rdDataInitialiser.o $(OBJPATH)/sortedRedundantNJ.o $(OBJPATH)/rapidDiskRedundant.o $(OBJPATH)/rapidNJMem.o $(OBJPATH)/rapidNJMemRedundant.o $(OBJPATH)/simpleNJ.o $(OBJPATH)/testNJ.o $(OBJPATH)/distanceCalculation/dnaBitString.o $(OBJPATH)/distanceCalculation/dataloaderPhylip.o $(OBJPATH)/distanceCalculation/hammingDistance.o $(OBJPATH)/distanceCalculation/bitDistanceNoGap.o $(OBJPATH)/distanceCalculation/bitDistanceGap.o $(OBJPATH)/distanceCalculation/JCdistance.o $(OBJPATH)/distanceCalculation/simpleDistanceCalculator.o $(OBJPATH)/distanceCalculation/dataloader.o $(OBJPATH)/distanceCalculation/KimuraDistance.o $(OBJPATH)/distanceCalculation/bitDistance.o $(OBJPATH)/distanceCalculation/bitDistanceProtein.o $(OBJPATH)/distanceCalculation/bitDistanceProteinPopCnt.o $(OBJPATH)/distanceCalculation/bitDistanceGapPopCnt.o $(OBJPATH)/bootstrapping/bootstrapper.o
objects_cuda = $(OBJPATH)/distanceCalculation/gpu/distanceCalculatorDNA_gpu.o $(OBJPATH)/distanceCalculation/gpu/distanceCalculatorProtein_gpu.o
all: nj
echo all: make complete
nj: $(objects)
$(CC) $(DEBUG) $(SWITCHES) $(OPTIMIZATION_LEVEL) -lpthread -lboost_program_options -o $(BINPATH)/[email protected] $+
nj_cuda: $(objects_cuda) $(objects)
$(CUDACC) $(DEBUG_CUDA) $(OPTIMIZATION_LEVEL) -lpthread -lboost_program_options -o $(BINPATH)/[email protected] $+
$(OBJPATH)/%.o: $(SRCPATH)/%.cu
$(CUDACC) $(DEBUG_CUDA) $(INCLUDES) $(OPTIMIZATION_LEVEL) -o [email protected] -c $<
# compile to objectfiles
$(OBJPATH)/%.o: $(SRCPATH)/%.cpp
$(CC) $(DEBUG) $(SWITCHES) $(OPTIMIZATION_LEVEL) $(INCLUDES) -o [email protected] -c $<
# clean target
clean:
-rm $(OBJPATH)/*.o
-rm $(OBJPATH)/distanceCalculation/*.o
-rm $(OBJPATH)/bootstrapping/*.o
-rm $(BINPATH)/*
echo clean: make complete
release:
mkdir rapidNJ
cp -R src rapidNJ/
cp -R obj rapidNJ/
cp -R bin rapidNJ/
cp Makefile rapidNJ/
find . -name "*.~" -exec rm {} \;
zip rapidNJ.zip rapidNJ/INSTALL rapidNJ/Makefile rapidNJ/src/* rapidNJ/src/distanceCalculation/* rapidNJ/src/distanceCalculation/gpu/* rapidNJ/src/bootstrapping/* rapidNJ/obj rapidNJ/obj/distanceCalculation rapidNJ/obj/distanceCalculation/gpu rapidNJ/obj/bootstrapping rapidNJ/bin
rm -Rf rapidNJ/
util:
g++ -O3 src/distanceCalculation/sim_seq.cpp -o bin/sim_seq
#Make sure that make rebuilds files if included headers change:
$(objects): $(SRCPATH)/stdinclude.h $(SRCPATH)/sortedNJ.h $(SRCPATH)/polytree.h $(SRCPATH)/rapidDisk.h $(SRCPATH)/diskMatrix.h $(SRCPATH)/rdDataInitialiser.h $(SRCPATH)/distMatrixReader.hpp $(SRCPATH)/node.h $(SRCPATH)/sortedRedundantNJ.h $(SRCPATH)/rapidDiskRedundant.h $(SRCPATH)/rapidNJMem.h $(SRCPATH)/rapidNJMemRedundant.hpp $(SRCPATH)/simpleNJ.h $(SRCPATH)/testNJ.h $(SRCPATH)/distanceCalculation/dataloader.hpp $(SRCPATH)/distanceCalculation/hammingDistance.hpp $(SRCPATH)/distanceCalculation/bitDistanceNoGap.hpp $(SRCPATH)/distanceCalculation/bitDistanceGap.hpp $(SRCPATH)/distanceCalculation/dnaBitString.hpp $(SRCPATH)/distanceCalculation/JCdistance.hpp $(SRCPATH)/distanceCalculation/simpleDistanceCalculator.hpp $(SRCPATH)/distanceCalculation/dataloaderStockholm.hpp $(SRCPATH)/distanceCalculation/dataloaderPhylip.hpp $(SRCPATH)/distanceCalculation/KimuraDistance.hpp $(SRCPATH)/distanceCalculation/bitStringUtils.hpp $(SRCPATH)/distanceCalculation/bitDistance.hpp $(SRCPATH)/distanceCalculation/bitDistanceProtein.hpp $(SRCPATH)/distanceCalculation/dataloaderMemory.hpp $(SRCPATH)/distanceCalculation/bitDistanceProteinPopCnt.hpp $(SRCPATH)/distanceCalculation/bitDistanceGapPopCnt.hpp $(SRCPATH)/bootstrapping/bootstrapper.hpp $(SRCPATH)/distanceCalculation/gpu/constants.hpp
.pro文件和Makefile從qtcreator不工作：提前
#-------------------------------------------------
#
# Project created by QtCreator 2010-08-13T16:54:50
#
#-------------------------------------------------
QT += core
QT -= gui
TARGET = rapidNJ
CONFIG += console
CONFIG -= app_bundle
TEMPLATE = app
SOURCES += main.cpp \
distMatrixReader.cpp \
diskMatrix.cpp \
threadedNJ.cpp \
testNJ.cpp \
sortedRedundantNJ.cpp \
sortedNJ.cpp \
simpleNJ.cpp \
rdDataInitialiser.cpp \
rapidNJMemRedundant.cpp \
node.cpp \
ninjaComparator.cpp \
rapidNJMem.cpp \
rapidDiskRedundant.cpp \
rapidDisk.cpp \
polytree.cpp \
distanceCalculation/simpleDistanceCalculator.cpp \
distanceCalculation/sim_seq.cpp \
distanceCalculation/KimuraDistance.cpp \
distanceCalculation/JCdistance.cpp \
distanceCalculation/hammingDistance.cpp \
distanceCalculation/dnaBitString.cpp \
distanceCalculation/dataloaderPhylip.cpp \
distanceCalculation/dataloader.cpp \
distanceCalculation/bitDistanceProteinPopCnt.cpp \
distanceCalculation/bitDistanceProtein.cpp \
distanceCalculation/bitDistanceNoGap.cpp \
distanceCalculation/bitDistanceGapPopCnt.cpp \
distanceCalculation/bitDistanceGap.cpp \
distanceCalculation/bitDistance.cpp \
distanceCalculation/gpu/distanceCalculatorProtein_gpu.cu \
distanceCalculation/gpu/distanceCalculatorDNA_gpu.cu \
bootstrapping/bootstrapper.cpp
OTHER_FILES += \
#distMatrixReader.cpp%23 \
ninjaComparator.cpp~ \
Makefile \
rapidNJ.pro.user \
distanceCalculation/dataloaderMemory.hpp~
HEADERS += \
distMatrixReader.hpp \
diskMatrix.h \
cluster_pair.h \
threadedNJ.h \
testNJ.h \
stdinclude.h \
sortedRedundantNJ.h \
sortedNJ.h \
simpleNJ.h \
rdDataInitialiser.h \
rapidNJMemRedundant.hpp \
minFinder.h \
rapidNJMem.h \
rapidDiskRedundant.h \
rapidDisk.h \
polytree.h \
node.h \
distanceCalculation/simpleDistanceCalculator.hpp \
distanceCalculation/KimuraDistance.hpp \
distanceCalculation/JCdistance.hpp \
distanceCalculation/hammingDistance.hpp \
distanceCalculation/dnaBitString.hpp \
distanceCalculation/dataloaderStockholm.hpp \
distanceCalculation/dataloaderPhylip.hpp \
distanceCalculation/dataloaderMemory.hpp \
distanceCalculation/dataloader.hpp \
distanceCalculation/bitStringUtils.hpp \
distanceCalculation/bitDistanceProteinPopCnt.hpp \
distanceCalculation/bitDistanceProtein.hpp \
distanceCalculation/bitDistanceNoGap.hpp \
distanceCalculation/bitDistanceGapPopCnt.hpp \
distanceCalculation/bitDistanceGap.hpp \
distanceCalculation/bitDistance.hpp \
distanceCalculation/gpu/cutil_inline_runtime.h \
distanceCalculation/gpu/cutil_inline.h \
distanceCalculation/gpu/cutil_inline_drvapi.h \
distanceCalculation/gpu/cutil_inline_bankchecker.h \
distanceCalculation/gpu/cutil.h \
distanceCalculation/gpu/constants.hpp \
bootstrapping/bootstrapper.hpp
INCLUDEPATH += \
bootstrapping \
distanceCalculation \
/usr/include/boost/program_options \
/usr/include/boost
感謝
如果您覺得這個問題很重要，那麼您應該編輯您的問題。 – 2010-08-13 16:50:47