2013-05-10 183 views
0

我在這裏發現了一個類似的問題,但我認爲我的問題是如果我解釋我的數據的權利。TukeyHSD在R的結果

我做我的簡單的方差分析,發現在我的數據,我有一個顯著不同(p.value < 0.05:

an<-aov(Value ~ Group, data=mydata) 

然後我做我的TukeyHSD:

TukeyHSD(an) 

和我的輸出看起來是這樣的:

Tukey multiple comparisons of means 
95% family-wise confidence level 

Fit: aov(formula = Value ~ Group, data = kwdata) 

      diff   lwr  upr  p adj 
X-A  -3.15668041 -8.0916672 1.7783064 0.6646288 
C-A  -2.07921381 -5.0632490 0.9048214 0.5209910 
D-A  0.54997509 -1.8916800 2.9916302 0.9999804 
w-X  3.79964159 -3.6284972 11.2277804 0.9108728 
D-C  2.62918890 -0.5801339 5.8385117 0.2473717 

如果我不正確地把我的組合與超過0.0的lwr值是具有最高顯着差異的組。這是正確的嗎?

我不知道我該如何檢測與tukeyhsd有顯着區別的組。

該輸出僅爲實際輸出的幾行。我的任務是分析多個組,並檢測具有顯着差異的組。

編輯:

現在,一個完整的例子:

Value<- c(-0.9944999814033508,-0.35850000381469727,0.7063000202178955,-1.774399995803833,-1.080299973487854,0.30550000071525574,1.8499999046325684,-0.4124999940395355,0.5827999711036682,1.7506999969482422,-6.693999767303467,-0.8779000043869019,-1.3408000469207764,1.2560999393463135,-0.10040000081062317,1.8499999046325684,-0.3319000005722046,0.4957999885082245,0.8779000043869019,0.7387999892234802,0.8779000043869019,0.9154000282287598,0.8779000043869019,0.7063000202178955,-1.3408000469207764,0.7063000202178955,-0.3319000005722046,-1.6448999643325806,0.4124999940395355,-1.6448999643325806,-0.8779000043869019,0.7487000226974487,0.4399000108242035,1.8499999046325684,-1.6448999643325806,-2.4323999881744385,1.2265000343322754,-0.4957999885082245,-9.999899864196777,-1.7506999969482422,-1.6448999643325806,-9.999899864196777,0.8779000043869019,-5.06279993057251,0.8779000043869019,-2.9677000045776367,-5.06279993057251,-6.693999767303467,-1.0990500450134277,0.9944999814033508,-0.4677000045776367,-0.35850000381469727,-9.999899864196777,0.5827999711036682,0.7487000226974487,0.7387999892234802,-0.2533000111579895,-9.999899864196777,-1.0363999605178833,0.30550000071525574,-1.1749999523162842,-0.8064000010490417,-9.999899864196777,-0.9944999814033508,-2.478300094604492,-0.1509999930858612,0.4957999885082245,-4.571800231933594,-6.324900150299072,-0.38530001044273376,-1.3408000469207764,-5.93179988861084,-6.693999767303467,-2.9677000045776367,0.8779000043869019,-0.050200000405311584,-1.774399995803833,-0.1509999930858612,-0.23725003004074097,-0.6432999968528748,1.2560999393463135,-0.10040000081062317,0.4399000108242035,-0.7063000202178955,0.9154000282287598,-0.21819999814033508,1.2265000343322754,-0.4124999940395355,0.17640000581741333,-1.4758000373840332,-0.9944999814033508,-1.080299973487854,-0.6432999968528748,-9.999899864196777,-2.0536999702453613,-0.21819999814033508,0.7487000226974487,0.025100000202655792,-1.0363999605178833,-0.050200000405311584,-0.7387999892234802,0.4957999885082245,-1.4758000373840332,-0.7063000202178955,0.17640000581741333,-5.06279993057251,-0.6432999968528748,-1.4758000373840332,-0.9944999814033508,-0.2533000111579895,0.17640000581741333,-0.3319000005722046,0.6776500344276428,0.30550000071525574,-0.050200000405311584,0.5827999711036682,1.2560999393463135,-0.4957999885082245,-0.38530001044273376,0.9944999814033508,-2.4323999881744385,1.1263999938964844,-0.9944999814033508,1.7506999969482422,1.080299973487854,-0.7387999892234802,-1.3408000469207764,0.6128000020980835,-2.0536999702453613,0.7063000202178955,-0.8064000010490417,-0.8779000043869019,-0.050200000405311584,-2.9677000045776367,-0.8779000043869019,-2.0536999702453613,-1.3408000469207764,-1.3408000469207764,-0.38530001044273376,0.7063000202178955,-9.999899864196777,-0.4677000045776367,0.7721999883651733,0.025100000202655792,1.1263999938964844,-6.324900150299072,-0.1509999930858612,-0.4399000108242035,-0.9944999814033508,-0.9944999814033508,-0.4677000045776367,-1.0363999605178833,-1.7506999969482422,1.2265000343322754,-0.8779000043869019,0.6128000020980835,-0.050200000405311584,0.5827999711036682,-0.7063000202178955,-0.6432999968528748,-0.23725003004074097,0.025100000202655792,0.4124999940395355,0.7721999883651733,-1.0990500450134277) 
Value<-c(Value,0.9944999814033508,-0.2533000111579895,1.2560999393463135,-0.21819999814033508,-1.1749999523162842,-0.38530001044273376,-0.4399000108242035,-0.7063000202178955,-2.478300094604492,-2.4323999881744385,0.9154000282287598,-0.23725003004074097,-0.38530001044273376,-1.6448999643325806,-0.050200000405311584,1.8499999046325684,-0.38530001044273376,-0.6432999968528748,-4.571800231933594,-6.693999767303467,-1.7506999969482422,1.080299973487854,0.4124999940395355,-1.3408000469207764,-5.93179988861084,-0.35850000381469727,-0.6432999968528748,-0.4124999940395355,-1.0990500450134277,-0.9944999814033508,-0.8064000010490417) 
Group<-factor(c(rep('D',18),rep('C',1),rep('A',7),rep('B',34),rep('E',3),rep('F',4),rep('G',10),rep('H',2),rep('I',29),rep('J',16),rep('N',1),rep('M',1),rep('Z',2),rep('X',67),rep('O',1))) 
mydata<-data.frame(Group, Value) 
summary(aov(Value ~Group,mydata)) 
TukeyHSD(aov(Value ~Group)) 

我的問題是:

  1. 我怎麼能檢測顯著差異?用p adj列和如果如何?
  2. (附加問題)我可以執行Tukey,然後執行pairwise.wilcoxon並獲得具有顯着不同的組的切割集。這是統計數據中的一種瘋狂的方式嗎?
+0

嘗試搜索關於計算器 「[R] tukeyhsd」。我最近回答了一個問題,應該給你一個好的開始。 (順便提一下,挑選具有顯着效果的成對比較,並忽略其餘的往往是不好的統計實踐...) – 2013-05-10 14:32:26

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好的我認爲我的任務有一個很大的錯誤...我認爲我做配對比較...... 。我在這裏看了一個問題,但它並沒有幫助我... – bladepit 2013-05-10 15:13:59

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可以請你發佈一個可重複的例子嗎? http://tinyurl.com/reproducible-000。如果你想要,你可以從http://stackoverflow.com/questions/16470404/tukeyhsd-adjusted-p-value-is-0-0000000/16471613#16471613複製這個例子,儘管你可能想用一個例子一些重要的和一些非重要的比較 – 2013-05-10 15:22:54

回答

0

我想你可以使用dimnames訪問不同組的名稱。

根據你的榜樣,測試第二組

tR <- TukeyHSD(aov(Value ~Group)) 

if(tR$Groups[2,4] < 0.05) { 
    paste("Group", dimnames(tR$Groups)[[1]][2] , "has a Probablity of" , tR$Groups[2, 4]) 
}